Please see attached Screenshot for Clarification:
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1. Configuration: SQLyog Pro
Saved first, early Scheduler at 02:00 AM
2. Configuration: WinSCP+Putty
Saved second, later Scheduler at 02:30 AM
As you can see, "WinSCP+Putty" has been executed FIRST, even though I have SAVED and SCHEDULED "SQLyo Pro" FIRST.